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15 lines
485 B
Text
15 lines
485 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { UCSC_LIFTOVER } from '../../../../modules/ucsc/liftover/main.nf' addParams( options: [:] )
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workflow test_ucsc_liftover {
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input = [ [ id:'test', single_end:false ], // meta map
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file(params.test_data['homo_sapiens']['genome']['genome_bed'], checkIfExists: true)]
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chain = file(params.test_data['homo_sapiens']['genome']['genome_chain_gz'], checkIfExists: true)
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UCSC_LIFTOVER ( input, chain )
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}
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