nf-core_modules/tests/modules/ultra/align/nextflow.config

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process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
withName: GFFREAD {
ext.args = '--sort-alpha --keep-genes -T'
ext.prefix = { "${gff.baseName}_sorted" }
}
withName: ULTRA_INDEX {
ext.args = '--disable_infer'
}
}