nf-core_modules/modules/khmer/uniquekmers/meta.yml

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name: "khmer_uniquekmers"
description:
keywords:
- khmer
- k-mer
- effective genome size
tools:
- "khmer":
description: khmer k-mer counting library
homepage: https://github.com/dib-lab/khmer
documentation: https://khmer.readthedocs.io/en/latest/
tool_dev_url: https://github.com/dib-lab/khmer
doi: "10.12688/f1000research.6924.1"
licence: ["BSD License"]
input:
- fasta:
type: file
description: fasta file
pattern: "*.{fa,fasta}"
- kmer_size:
type: value
description: k-mer size to use
pattern: "[0-9]+"
output:
- report:
type: file
description: Text file containing unique-kmers.py execution report
pattern: "report.txt"
- kmers:
type: file
description: Text file containing number of kmers
pattern: "kmers.txt"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@JoseEspinosa"