nf-core_modules/tests/modules/delly/call/test.yml

- name: delly call test_delly_call_bam
  command: nextflow run ./tests/modules/delly/call -entry test_delly_call_bam -c ./tests/config/nextflow.config  -c ./tests/modules/delly/call/nextflow.config
  tags:
    - delly
    - delly/call
  files:
    - path: output/delly/test.bcf
      md5sum: 82be17d3b18b80ef5f37627bb579b07b
    - path: output/delly/test.bcf.csi
      md5sum: c198abfc14584c5ac69c004057927e0b

- name: delly call test_delly_call_cram
  command: nextflow run ./tests/modules/delly/call -entry test_delly_call_cram -c ./tests/config/nextflow.config  -c ./tests/modules/delly/call/nextflow.config
  tags:
    - delly
    - delly/call
  files:
    - path: output/delly/test.bcf
      md5sum: 4f6ae6b5800ae824ba35674f2903cd5c
    - path: output/delly/test.bcf.csi
      md5sum: 19e0cdf06c415f4942f6d4dbd5fb7271

- name: delly call test_delly_call_exclude_regions
  command: nextflow run ./tests/modules/delly/call -entry test_delly_call_exclude_regions -c ./tests/config/nextflow.config  -c ./tests/modules/delly/call/nextflow.config
  tags:
    - delly
    - delly/call
  files:
    - path: output/delly/test.bcf
      md5sum: 4f6ae6b5800ae824ba35674f2903cd5c
    - path: output/delly/test.bcf.csi
      md5sum: 19e0cdf06c415f4942f6d4dbd5fb7271
Update delly/call version (#1991) updated version + added tests 2022-09-02 04:08:41 -04:00			`- name: delly call test_delly_call_bam`
updated the version of delly (#2105) 2022-09-27 02:57:36 -04:00			`command: nextflow run ./tests/modules/delly/call -entry test_delly_call_bam -c ./tests/config/nextflow.config -c ./tests/modules/delly/call/nextflow.config`
Delly/call (#565) * testing works but need to fix paths and add exclude list * edited meta file and removed TODOs * left over TODOs * test passed, final push * resolving initial comments * Update software/delly/call/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-07-06 07:54:14 -04:00			`tags:`
			`- delly`
Update for the delly/call module (#2008) * updated the delly/call module * Update modules/delly/call/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> 2022-09-05 06:09:55 -04:00			`- delly/call`
Update delly/call version (#1991) updated version + added tests 2022-09-02 04:08:41 -04:00			`files:`
			`- path: output/delly/test.bcf`
updated the version of delly (#2105) 2022-09-27 02:57:36 -04:00			`md5sum: 82be17d3b18b80ef5f37627bb579b07b`
Update delly/call version (#1991) updated version + added tests 2022-09-02 04:08:41 -04:00			`- path: output/delly/test.bcf.csi`
			`md5sum: c198abfc14584c5ac69c004057927e0b`

			`- name: delly call test_delly_call_cram`
updated the version of delly (#2105) 2022-09-27 02:57:36 -04:00			`command: nextflow run ./tests/modules/delly/call -entry test_delly_call_cram -c ./tests/config/nextflow.config -c ./tests/modules/delly/call/nextflow.config`
Update delly/call version (#1991) updated version + added tests 2022-09-02 04:08:41 -04:00			`tags:`
Update for the delly/call module (#2008) * updated the delly/call module * Update modules/delly/call/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> 2022-09-05 06:09:55 -04:00			`- delly`
Delly/call (#565) * testing works but need to fix paths and add exclude list * edited meta file and removed TODOs * left over TODOs * test passed, final push * resolving initial comments * Update software/delly/call/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-07-06 07:54:14 -04:00			`- delly/call`
Update for the delly/call module (#2008) * updated the delly/call module * Update modules/delly/call/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> 2022-09-05 06:09:55 -04:00			`files:`
			`- path: output/delly/test.bcf`
updated the version of delly (#2105) 2022-09-27 02:57:36 -04:00			`md5sum: 4f6ae6b5800ae824ba35674f2903cd5c`
Update for the delly/call module (#2008) * updated the delly/call module * Update modules/delly/call/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> 2022-09-05 06:09:55 -04:00			`- path: output/delly/test.bcf.csi`
			`md5sum: 19e0cdf06c415f4942f6d4dbd5fb7271`

			`- name: delly call test_delly_call_exclude_regions`
updated the version of delly (#2105) 2022-09-27 02:57:36 -04:00			`command: nextflow run ./tests/modules/delly/call -entry test_delly_call_exclude_regions -c ./tests/config/nextflow.config -c ./tests/modules/delly/call/nextflow.config`
Update for the delly/call module (#2008) * updated the delly/call module * Update modules/delly/call/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> 2022-09-05 06:09:55 -04:00			`tags:`
Update delly/call version (#1991) updated version + added tests 2022-09-02 04:08:41 -04:00			`- delly`
Update for the delly/call module (#2008) * updated the delly/call module * Update modules/delly/call/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> 2022-09-05 06:09:55 -04:00			`- delly/call`
Delly/call (#565) * testing works but need to fix paths and add exclude list * edited meta file and removed TODOs * left over TODOs * test passed, final push * resolving initial comments * Update software/delly/call/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-07-06 07:54:14 -04:00			`files:`
			`- path: output/delly/test.bcf`
updated the version of delly (#2105) 2022-09-27 02:57:36 -04:00			`md5sum: 4f6ae6b5800ae824ba35674f2903cd5c`
Delly/call (#565) * testing works but need to fix paths and add exclude list * edited meta file and removed TODOs * left over TODOs * test passed, final push * resolving initial comments * Update software/delly/call/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-07-06 07:54:14 -04:00			`- path: output/delly/test.bcf.csi`
			`md5sum: 19e0cdf06c415f4942f6d4dbd5fb7271`