nf-core_modules/tests/software/deeptools/plotfingerprint/main.nf

18 lines
576 B
Text
Raw Normal View History

#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
params.fragment_size = 1000
include { DEEPTOOLS_PLOTFINGERPRINT } from '../../../../software/deeptools/plotfingerprint/main.nf' addParams( options: [:] )
workflow test_deeptools_plotfingerprint {
input = [ [ id:'test' ], // meta map
file(params.test_data['sarscov2']['illumina']['test_paired_end_sorted_bam'], checkIfExists: true),
file(params.test_data['sarscov2']['illumina']['test_paired_end_sorted_bam_bai'], checkIfExists: true)
]
DEEPTOOLS_PLOTFINGERPRINT ( input )
}