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25 lines
737 B
Text
25 lines
737 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { UNICYCLER } from '../../../software/unicycler/main.nf' addParams( options: [:] )
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workflow test_unicycler_single_end {
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def input = []
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input = [ [ id:'test', single_end:true ], // meta map
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[ file("${launchDir}/tests/data/generic/fastq/test_R1.fastq.gz", checkIfExists: true) ] ]
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UNICYCLER ( input )
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}
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workflow test_unicycler_paired_end {
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def input = []
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input = [ [ id:'test', single_end:false ], // meta map
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[ file("${launchDir}/tests/data/generic/fastq/test_R1.fastq.gz", checkIfExists: true),
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file("${launchDir}/tests/data/generic/fastq/test_R2.fastq.gz", checkIfExists: true) ] ]
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UNICYCLER ( input )
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}
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