nf-core_modules/software/bedtools/complementbed/test/main.nf

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2020-07-14 13:50:35 +00:00
#!/usr/bin/env nextflow
nextflow.preview.dsl = 2
params.complementbed_args = ''
include check_output from '../../../../tests/functions/check_process_outputs.nf' // params(params)
include COMPLEMENT_BED from '../main.nf' params(params)
// Define input channels
ch_input = Channel.fromPath('./input_data/A.bed')
chrom_sizes = Channel.fromPath('./input_data/genome.sizes')
// Run the workflow
workflow {
COMPLEMENT_BED(ch_input, chrom_sizes, params.complementbed_args)
// .check_output()
}