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fixed linting errors

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kevinmenden 2020-12-18 09:50:05 +01:00
parent 0eb20c14bf
commit 07f0a2476a
4 changed files with 36 additions and 36 deletions
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1
software/bowtie/align/functions.nf
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@ -1,3 +1,4 @@
/* /*
* ----------------------------------------------------- * -----------------------------------------------------
* Utility functions used in nf-core DSL2 module files * Utility functions used in nf-core DSL2 module files

1
software/bowtie/index/functions.nf
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@ -1,3 +1,4 @@
/* /*
* ----------------------------------------------------- * -----------------------------------------------------
* Utility functions used in nf-core DSL2 module files * Utility functions used in nf-core DSL2 module files

6
tests/software/bowtie/test.yml
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@ -17,7 +17,7 @@
- path: output/bowtie/bowtie/NC_010473.index.rev.2.ebwt - path: output/bowtie/bowtie/NC_010473.index.rev.2.ebwt
md5sum: f3c398bba5158f4039334a932d79c051 md5sum: f3c398bba5158f4039334a932d79c051
- name: Run bowtie index and align signle-end - name: Run bowtie index and align single-end
command: nextflow run ./tests/software/bowtie -profile docker -entry test_bowtie_alignment_single_end -c tests/config/nextflow.config command: nextflow run ./tests/software/bowtie -profile docker -entry test_bowtie_alignment_single_end -c tests/config/nextflow.config
tags: tags:
- bowtie - bowtie
@ -40,8 +40,7 @@
- path: output/bowtie/test.bam - path: output/bowtie/test.bam
md5sum: 8179c68a819accbc9137dc881736106f md5sum: 8179c68a819accbc9137dc881736106f
- name: Run bowtie index and align paired-end
- name: Run bowtie index and align paired_end
command: nextflow run ./tests/software/bowtie -profile docker -entry test_bowtie_alignment_paired_end -c tests/config/nextflow.config command: nextflow run ./tests/software/bowtie -profile docker -entry test_bowtie_alignment_paired_end -c tests/config/nextflow.config
tags: tags:
- bowtie - bowtie
@ -63,4 +62,3 @@
md5sum: a23e9a2a76e949aeb3693bcfae41a615 md5sum: a23e9a2a76e949aeb3693bcfae41a615
- path: output/bowtie/test.bam - path: output/bowtie/test.bam
md5sum: 9ce5aebf37128f4bb1d24e9548e22009 md5sum: 9ce5aebf37128f4bb1d24e9548e22009