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Check only for vcf file to exists (includes cmd)

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This commit is contained in:
JoseEspinosa 2021-02-26 07:14:29 +01:00
parent ea6fde0193
commit 155c2a1185
1 changed files with 2 additions and 2 deletions
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4
tests/software/tiddit/sv/test.yml
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@ -10,7 +10,7 @@
- path: output/tiddit/test.signals.tab - path: output/tiddit/test.signals.tab
md5sum: 67e041b737fe0fe1a33119c3109e9eff md5sum: 67e041b737fe0fe1a33119c3109e9eff
- path: output/tiddit/test.vcf - path: output/tiddit/test.vcf
md5sum: 24e749d49a2e91acdfb3bc13c1c6e51d should_exist: true
- name: tiddit sv no ref - name: tiddit sv no ref
command: nextflow run ./tests/software/tiddit/sv -entry test_tiddit_sv_no_ref -c tests/config/nextflow.config command: nextflow run ./tests/software/tiddit/sv -entry test_tiddit_sv_no_ref -c tests/config/nextflow.config
@ -24,4 +24,4 @@
- path: output/tiddit/test.signals.tab - path: output/tiddit/test.signals.tab
md5sum: 67e041b737fe0fe1a33119c3109e9eff md5sum: 67e041b737fe0fe1a33119c3109e9eff
- path: output/tiddit/test.vcf - path: output/tiddit/test.vcf
md5sum: 24e749d49a2e91acdfb3bc13c1c6e51d should_exist: true