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luslab-umitools | Changed from shell to script inline with best practice

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This commit is contained in:
Chris Cheshire 2020-06-26 08:19:54 +01:00
parent 723279c25e
commit 16c9c12eee
1 changed files with 1 additions and 1 deletions
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tools/umi_tools/main.nf
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@ -20,7 +20,7 @@ process umitools_dedup {
tuple val(sample_id), path("*.dedup.bam"), emit: dedupBam tuple val(sample_id), path("*.dedup.bam"), emit: dedupBam
path "*.dedup.log", emit: report path "*.dedup.log", emit: report
shell: script:
// Init // Init
internal_prog = "umi_tools dedup" internal_prog = "umi_tools dedup"