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luslab-umitools | Simplified docker file

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This commit is contained in:
Chris Cheshire 2020-06-26 08:17:45 +01:00
parent 0f5da3bd99
commit 723279c25e
1 changed files with 1 additions and 8 deletions
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tools/umi_tools/Dockerfile
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@ -2,14 +2,7 @@ FROM nfcore/base:1.7
LABEL authors="chris.cheshire@crick.ac.uk" \
description="Docker image containing all requirements for the nf-core umi_tools module"
# Install apt packages
RUN apt-get update \
&& apt-get install -y --no-install-recommends \
procps=2:3.3.15-2 \
&& apt-get clean \
&& rm -rf /var/lib/apt/lists/*
# Install conda packages
COPY environment.yml /
RUN conda env create -f /environment.yml && conda clean -a
ENV PATH /opt/conda/envs/nfcore-module-umitools/bin:$PATH
ENV PATH /opt/conda/envs/nfcore-module-umitools/bin:$PATH