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Update test-data commit and references

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This commit is contained in:
Piotr Faba 2020-03-06 13:59:14 +00:00
parent 490eca706c
commit 1c941ef8d6
2 changed files with 5 additions and 5 deletions
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2
test-datasets

@ -1 +1 @@
Subproject commit be215c0874e2485f0d8e12a6f0addf08f2cd08df
Subproject commit aae85a5c9c72238959108212481ce83bae569709

8
tools/cutadapt/test_single/main.nf
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@ -5,10 +5,10 @@ include '../main.nf' params(params)
// Define input channels
readPaths = [
['SRR4238351', '../../../test-datasets/tools/fastqc/input/SRR4238351_subsamp.fastq.gz'],
['SRR4238355', '../../../test-datasets/tools/fastqc/input/SRR4238355_subsamp.fastq.gz'],
['SRR4238359', '../../../test-datasets/tools/fastqc/input/SRR4238359_subsamp.fastq.gz'],
['SRR4238379', '../../../test-datasets/tools/fastqc/input/SRR4238379_subsamp.fastq.gz']
['SRR4238351', '../../../test-datasets/tools/cutadapt/input/SRR4238351_subsamp.fastq.gz'],
['SRR4238355', '../../../test-datasets/tools/cutadapt/input/SRR4238355_subsamp.fastq.gz'],
['SRR4238359', '../../../test-datasets/tools/cutadapt/input/SRR4238359_subsamp.fastq.gz'],
['SRR4238379', '../../../test-datasets/tools/cutadapt/input/SRR4238379_subsamp.fastq.gz']
]
Channel
.from(readPaths)