millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-22 11:08:17 +00:00
Code Issues Releases Packages Activity

changed to tab

Browse source
This commit is contained in:
SusiJo 2022-05-31 15:29:27 +02:00
parent 810564deca
commit 37b543e3e7
1 changed files with 1 additions and 1 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

2
tests/modules/gatk4/markduplicatesspark/test.yml
View file

@ -25,4 +25,4 @@
- path: output/gatk4/test.bam - path: output/gatk4/test.bam
md5sum: 898cb0a6616897d8ada90bab53bf0837 md5sum: 898cb0a6616897d8ada90bab53bf0837
- path: output/gatk4/test.metrics - path: output/gatk4/test.metrics
contains: "## METRICS CLASS\torg.broadinstitute.hellbender.utils.read.markduplicates.GATKDuplicationMetrics\nLIBRARY\tUNPAIRED_READS_EXAMINED READ_PAIRS_EXAMINED\tSECONDARY_OR_SUPPLEMENTARY_RDS\tUNMAPPED_READS\tUNPAIRED_READ_DUPLICATES\tREAD_PAIR_DUPLICATES\tREAD_PAIR_OPTICAL_DUPLICATESPERCENT_DUPLICATION\tESTIMATED_LIBRARY_SIZE\ntestN\t0\t2820\t2\t2\t0\t828\t0\t0.293617\t3807\ntestT\t0\t2718\t0\t0\t0\t716\t0\t0.263429\t4206" contains: "## METRICS CLASS org.broadinstitute.hellbender.utils.read.markduplicates.GATKDuplicationMetrics"