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fix input cardinality for index

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This commit is contained in:
Rike 2022-05-23 12:26:12 +02:00
parent 175ea9b7f9
commit 3af61cfbbc
2 changed files with 3 additions and 1 deletions
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3
tests/modules/gatk4/cnnscorevariants/main.nf
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@ -7,7 +7,8 @@ include { GATK4_CNNSCOREVARIANTS } from '../../../../modules/gatk4/cnnscorevaria
workflow test_gatk4_cnnscorevariants { workflow test_gatk4_cnnscorevariants {
input = [ [ id:'test' ], // meta map input = [ [ id:'test' ], // meta map
file(params.test_data['homo_sapiens']['illumina']['test_genome_vcf'], checkIfExists: true), file(params.test_data['homo_sapiens']['illumina']['test_genome_vcf_gz'], checkIfExists: true),
file(params.test_data['homo_sapiens']['illumina']['test_genome_vcf_gz_tbi'], checkIfExists: true),
[], [],
[] []
] ]

1
tests/modules/gatk4/cnnscorevariants/test.yml
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@ -7,3 +7,4 @@
- path: output/gatk4/test.vcf.gz - path: output/gatk4/test.vcf.gz
contains: contains:
- "##ALT=<ID=NON_REF,Description=" - "##ALT=<ID=NON_REF,Description="
- path: output/gatk4/test.vcf.gz.tbi