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updated config to reflect names in test workflow

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Carpanzano 2022-05-02 16:14:38 +02:00
parent 38d9d81aaf
commit 42310cbce2
1 changed files with 2 additions and 2 deletions
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tests/modules/krona/ktimporttaxonomy/nextflow.config
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@ -2,11 +2,11 @@ process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" } publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
withName: KRONA_KTIMPORTTAXONOMY_READS { withName: TAXONOMY_READS {
ext.args = '-t 3' ext.args = '-t 3'
} }
withName: KRONA_KTIMPORTTAXONOMY_REPORT { withName: TAXONOMY_REPORT {
ext.args = '-m 3 -t 5' ext.args = '-m 3 -t 5'
} }