[bug] pin bioperl version in Prokka module

2 years ago · 4279c84463
parent 7560689375
commit 4279c84463
1 changed files with 1 additions and 1 deletions
--- a/modules/prokka/main.nf
+++ b/modules/prokka/main.nf
@ -2,7 +2,7 @@ process PROKKA {
    tag "$meta.id"
    label 'process_low'

-    conda (params.enable_conda ? "bioconda::prokka=1.14.6" : null)
+    conda (params.enable_conda ? "bioconda::prokka=1.14.6  bioconda::perl-bioperl=1.7.2" : null)
    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
        'https://depot.galaxyproject.org/singularity/prokka:1.14.6--pl526_0' :
        'quay.io/biocontainers/prokka:1.14.6--pl526_0' }"