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Update main.nf (#938)

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Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
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Robert A. Petit III 2021-11-15 07:47:41 -07:00 committed by GitHub
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modules/spatyper/main.nf
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@ -31,7 +31,6 @@ process SPATYPER {
def prefix = options.suffix ? "${meta.id}${options.suffix}" : "${meta.id}" def prefix = options.suffix ? "${meta.id}${options.suffix}" : "${meta.id}"
def input_args = repeats && repeat_order ? "-r ${repeats} -o ${repeat_order}" : "" def input_args = repeats && repeat_order ? "-r ${repeats} -o ${repeat_order}" : ""
""" """
env
spaTyper \\ spaTyper \\
$options.args \\ $options.args \\
$input_args \\ $input_args \\