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Adding tbi-files to the output from GATK4_MERGEVCFS. #1709

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Anders Sune Pedersen 2022-05-31 15:37:26 +02:00
parent 3bb32b2def
commit 5513d095f5
2 changed files with 7 additions and 0 deletions
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1
modules/gatk4/mergevcfs/main.nf
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@ -13,6 +13,7 @@ process GATK4_MERGEVCFS {
output: output:
tuple val(meta), path('*.vcf.gz'), emit: vcf tuple val(meta), path('*.vcf.gz'), emit: vcf
tuple val(meta), path("*.tbi") , emit: tbi
path "versions.yml" , emit: versions path "versions.yml" , emit: versions
when: when:

6
modules/gatk4/mergevcfs/meta.yml
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@ -35,6 +35,12 @@ output:
type: file type: file
description: merged vcf file description: merged vcf file
pattern: "*.vcf.gz" pattern: "*.vcf.gz"
- tbi:
type: file
description: index files for the merged vcf files
pattern: "*.tbi"
- versions: - versions:
type: file type: file
description: File containing software versions description: File containing software versions