millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-09-21 07:42:05 +00:00
Code Issues Releases Packages Activity

Add all tests back in

Browse source
This commit is contained in:
FriederikeHanssen 2021-02-24 09:57:23 +01:00
parent 8a7333c13b
commit 7627e656ee
1 changed files with 84 additions and 84 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

168
tests/software/seqkit/split2/test.yml
View file

@ -12,91 +12,91 @@
md5sum: 0dfb5284ee0bb7e1b77b57dc1bd16311 md5sum: 0dfb5284ee0bb7e1b77b57dc1bd16311
# - name: seqkit split2 single-end size - name: seqkit split2 single-end size
# command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_single_end_size -c tests/config/nextflow.config command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_single_end_size -c tests/config/nextflow.config
# tags: tags:
# - seqkit - seqkit
# - seqkit_split2 - seqkit_split2
# - seqkit_split2_single_end - seqkit_split2_single_end
# - size - size
# files: files:
# - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz
# md5sum: e76ac276819eb862c0a931755a220b50 md5sum: e76ac276819eb862c0a931755a220b50
# - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz
# md5sum: 79eb15ff1aac645308fab188915f9edf md5sum: 79eb15ff1aac645308fab188915f9edf
# - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz
# md5sum: f01fa62d34012a2e9cc48972dfe8c14c md5sum: f01fa62d34012a2e9cc48972dfe8c14c
# - name: seqkit split2 single-end part - name: seqkit split2 single-end part
# command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_single_end_part -c tests/config/nextflow.config command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_single_end_part -c tests/config/nextflow.config
# tags: tags:
# - seqkit - seqkit
# - seqkit_split2 - seqkit_split2
# - seqkit_split2_single_end - seqkit_split2_single_end
# - part - part
# files: files:
# - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz
# md5sum: c394bc973e1f0f9bda835e4a7610d2e1 md5sum: c394bc973e1f0f9bda835e4a7610d2e1
# - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz
# md5sum: 152e4470b8caeed1fc1c0326f34aa4e6 md5sum: 152e4470b8caeed1fc1c0326f34aa4e6
# - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz
# md5sum: 6d8a9f6ed0f4eadbb8b1c560bfea384d md5sum: 6d8a9f6ed0f4eadbb8b1c560bfea384d
# - name: seqkit split2 paired-end length - name: seqkit split2 paired-end length
# command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_paired_end_length -c tests/config/nextflow.config command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_paired_end_length -c tests/config/nextflow.config
# tags: tags:
# - seqkit - seqkit
# - seqkit_split2 - seqkit_split2
# - seqkit_split2_paired_end - seqkit_split2_paired_end
# - length - length
# files: files:
# - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz
# md5sum: fb45cfec0d0d37f85abe81a0d299137e md5sum: fb45cfec0d0d37f85abe81a0d299137e
# - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz
# md5sum: 0dfb5284ee0bb7e1b77b57dc1bd16311 md5sum: 0dfb5284ee0bb7e1b77b57dc1bd16311
# - path: output/seqkit/test.split/SRR396636_R2.part_001.fastq.gz - path: output/seqkit/test.split/SRR396636_R2.part_001.fastq.gz
# md5sum: 4e9704a4a0f4bcab4900b6fcd9323d8a md5sum: 4e9704a4a0f4bcab4900b6fcd9323d8a
# - path: output/seqkit/test.split/SRR396636_R2.part_002.fastq.gz - path: output/seqkit/test.split/SRR396636_R2.part_002.fastq.gz
# md5sum: da93241d0cfa84d4b806e1e102c16977 md5sum: da93241d0cfa84d4b806e1e102c16977
# - name: seqkit split2 paired-end size - name: seqkit split2 paired-end size
# command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_paired_end_size -c tests/config/nextflow.config command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_paired_end_size -c tests/config/nextflow.config
# tags: tags:
# - seqkit - seqkit
# - seqkit_split2 - seqkit_split2
# - seqkit_split2_paired_end - seqkit_split2_paired_end
# - size - size
# files: files:
# - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz
# md5sum: e76ac276819eb862c0a931755a220b50 md5sum: e76ac276819eb862c0a931755a220b50
# - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz
# md5sum: 79eb15ff1aac645308fab188915f9edf md5sum: 79eb15ff1aac645308fab188915f9edf
# - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz
# md5sum: f01fa62d34012a2e9cc48972dfe8c14c md5sum: f01fa62d34012a2e9cc48972dfe8c14c
# - path: output/seqkit/test.split/SRR396636_R2.part_001.fastq.gz - path: output/seqkit/test.split/SRR396636_R2.part_001.fastq.gz
# md5sum: 357bfa5b981f34d87f682aebcf5e46fe md5sum: 357bfa5b981f34d87f682aebcf5e46fe
# - path: output/seqkit/test.split/SRR396636_R2.part_002.fastq.gz - path: output/seqkit/test.split/SRR396636_R2.part_002.fastq.gz
# md5sum: f48f3389d2870f4934139a901e5c4bb2 md5sum: f48f3389d2870f4934139a901e5c4bb2
# - path: output/seqkit/test.split/SRR396636_R2.part_003.fastq.gz - path: output/seqkit/test.split/SRR396636_R2.part_003.fastq.gz
# md5sum: d161aa05bac2f7d1823da0479949512b md5sum: d161aa05bac2f7d1823da0479949512b
# - name: seqkit split2 paired-end part - name: seqkit split2 paired-end part
# command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_paired_end_part -c tests/config/nextflow.config command: nextflow run ./tests/software/seqkit/split2 -entry test_seqkit_split2_paired_end_part -c tests/config/nextflow.config
# tags: tags:
# - seqkit - seqkit
# - seqkit_split2 - seqkit_split2
# - seqkit_split2_paired_end - seqkit_split2_paired_end
# - part - part
# files: files:
# - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_001.fastq.gz
# md5sum: c394bc973e1f0f9bda835e4a7610d2e1 md5sum: c394bc973e1f0f9bda835e4a7610d2e1
# - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_002.fastq.gz
# md5sum: 152e4470b8caeed1fc1c0326f34aa4e6 md5sum: 152e4470b8caeed1fc1c0326f34aa4e6
# - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz
# md5sum: 6d8a9f6ed0f4eadbb8b1c560bfea384d md5sum: 6d8a9f6ed0f4eadbb8b1c560bfea384d
# - path: output/seqkit/test.split/SRR396636_R2.part_001.fastq.gz - path: output/seqkit/test.split/SRR396636_R2.part_001.fastq.gz
# md5sum: 228aff8f1e56050967476fcad164a4fc md5sum: 228aff8f1e56050967476fcad164a4fc
# - path: output/seqkit/test.split/SRR396636_R2.part_002.fastq.gz - path: output/seqkit/test.split/SRR396636_R2.part_002.fastq.gz
# md5sum: 41047f3df10126c0df7f8e9bfd752b83 md5sum: 41047f3df10126c0df7f8e9bfd752b83
# - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz - path: output/seqkit/test.split/SRR396636_R1.part_003.fastq.gz
# md5sum: 6d8a9f6ed0f4eadbb8b1c560bfea384d md5sum: 6d8a9f6ed0f4eadbb8b1c560bfea384d