millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-22 02:58:17 +00:00
Code Issues Releases Packages Activity

update gatk4 yml for spark (#1538)

Browse source
This commit is contained in:
Maxime U. Garcia 2022-04-19 16:51:59 +02:00 committed by GitHub
parent a6cb75174b
commit 7630e278f3
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 12 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

12
tests/config/pytest_modules.yml
View file

@ -659,6 +659,10 @@ gatk4/applybqsr:
- modules/gatk4/applybqsr/**
- tests/modules/gatk4/applybqsr/**
gatk4/applybqsrspark:
- modules/gatk4/applybqsrspark/**
- tests/modules/gatk4/applybqsrspark/**
gatk4/applyvqsr:
- modules/gatk4/applyvqsr/**
- tests/modules/gatk4/applyvqsr/**
@ -667,6 +671,10 @@ gatk4/baserecalibrator:
- modules/gatk4/baserecalibrator/**
- tests/modules/gatk4/baserecalibrator/**
gatk4/baserecalibratorspark:
- modules/gatk4/baserecalibratorspark/**
- tests/modules/gatk4/baserecalibratorspark/**
gatk4/bedtointervallist:
- modules/gatk4/bedtointervallist/**
- tests/modules/gatk4/bedtointervallist/**
@ -743,6 +751,10 @@ gatk4/markduplicates:
- modules/gatk4/markduplicates/**
- tests/modules/gatk4/markduplicates/**
gatk4/markduplicatesspark:
- modules/gatk4/markduplicatesspark/**
- tests/modules/gatk4/markduplicatesspark/**
gatk4/mergebamalignment:
- modules/gatk4/mergebamalignment/**
- tests/modules/gatk4/mergebamalignment/**