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Update tests/software/ivar/variants/main.nf

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Harshil Patel 2021-02-16 23:01:27 +00:00 committed by GitHub
parent 27020105aa
commit 7c276d2974
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tests/software/ivar/variants/main.nf
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@ -16,6 +16,9 @@ workflow test_ivar_variants_no_gff_no_mpileup {
IVAR_VARIANTS ( input, ref, dummy ) IVAR_VARIANTS ( input, ref, dummy )
} }
params.gff = false
params.save_mpileup = true
workflow test_ivar_variants_no_gff_with_mpileup { workflow test_ivar_variants_no_gff_with_mpileup {
def ref = file("${launchDir}/tests/data/fasta/sarscov2/MN908947.3.fa", checkIfExists: true) def ref = file("${launchDir}/tests/data/fasta/sarscov2/MN908947.3.fa", checkIfExists: true)
def dummy = file("${launchDir}/tests/data/dummy/dummy_file.txt", checkIfExists: true) def dummy = file("${launchDir}/tests/data/dummy/dummy_file.txt", checkIfExists: true)