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Improve descriptions for modules with missing
Description and keywords Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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10 changed files with 18 additions and 10 deletions
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@ -1,9 +1,10 @@
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name: bbmap_align
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description: write your description here
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description: Align short or PacBio reads to a reference genome using BBMap
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keywords:
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- align
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- map
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- fasta
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- fastq
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- genome
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- reference
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tools:
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@ -4,6 +4,7 @@ keywords:
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- trimming
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- adapter trimming
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- quality trimming
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- fastq
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tools:
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- bbmap:
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description: BBMap is a short read aligner, as well as various other bioinformatic tools.
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@ -1,8 +1,9 @@
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name: bbmap_bbsplit
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description: write your description here
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description: Split sequencing reads by mapping them to multiple references simultaneously
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keywords:
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- align
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- map
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- fastq
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- genome
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- reference
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tools:
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@ -1,7 +1,7 @@
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name: bbmap_index
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description: This module calls bbmap.sh to create an index from a fasta file, ready to be used by bbmap.sh in mapping mode.
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description: Creates an index from a fasta file, ready to be used by bbmap.sh in mapping mode.
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keywords:
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- mapping
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- map
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- index
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- fasta
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tools:
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@ -2,6 +2,8 @@ name: bowtie_align
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description: Align reads to a reference genome using bowtie
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keywords:
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- align
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- map
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- fastq
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- fasta
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- genome
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- reference
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@ -2,7 +2,9 @@ name: bowtie2_align
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description: Align reads to a reference genome using bowtie2
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keywords:
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- align
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- map
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- fasta
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- fastq
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- genome
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- reference
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tools:
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@ -1,5 +1,5 @@
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name: expansionhunter
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description: write your description here
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description: Estimate repeat sizes using NGS data
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keywords:
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- STR
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- repeat_expansions
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@ -1,7 +1,9 @@
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name: fastani
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description: write your description here
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description: Alignment-free computation of average nucleotide Identity (ANI)
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keywords:
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- fastani
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- genome
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- fasta
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- ANI
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tools:
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- fastani:
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description: FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).
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@ -1,5 +1,5 @@
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name: gatk4_gatherbqsrreports
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description: write your description here
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description: Gathers scattered BQSR recalibration reports into a single file
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keywords:
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- gatk4
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- gatk4_gatherbqsrreports
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@ -1,10 +1,9 @@
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name: samtools_ampliconclip
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description: write your description here
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description: Clips read alignments where they match BED file defined regions
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keywords:
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- amplicon
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- clipping
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- ampliconclip
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- samtools ampliconclip
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- samtools
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tools:
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- samtools:
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