Improve descriptions for modules with missing

Description and keywords

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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Aleksei Korzhenkov 2022-07-06 13:03:08 +03:00 committed by GitHub
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10 changed files with 18 additions and 10 deletions

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@ -1,9 +1,10 @@
name: bbmap_align name: bbmap_align
description: write your description here description: Align short or PacBio reads to a reference genome using BBMap
keywords: keywords:
- align - align
- map - map
- fasta - fasta
- fastq
- genome - genome
- reference - reference
tools: tools:

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@ -4,6 +4,7 @@ keywords:
- trimming - trimming
- adapter trimming - adapter trimming
- quality trimming - quality trimming
- fastq
tools: tools:
- bbmap: - bbmap:
description: BBMap is a short read aligner, as well as various other bioinformatic tools. description: BBMap is a short read aligner, as well as various other bioinformatic tools.

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name: bbmap_bbsplit name: bbmap_bbsplit
description: write your description here description: Split sequencing reads by mapping them to multiple references simultaneously
keywords: keywords:
- align - align
- map - map
- fastq
- genome - genome
- reference - reference
tools: tools:

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@ -1,7 +1,7 @@
name: bbmap_index name: bbmap_index
description: This module calls bbmap.sh to create an index from a fasta file, ready to be used by bbmap.sh in mapping mode. description: Creates an index from a fasta file, ready to be used by bbmap.sh in mapping mode.
keywords: keywords:
- mapping - map
- index - index
- fasta - fasta
tools: tools:

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@ -2,6 +2,8 @@ name: bowtie_align
description: Align reads to a reference genome using bowtie description: Align reads to a reference genome using bowtie
keywords: keywords:
- align - align
- map
- fastq
- fasta - fasta
- genome - genome
- reference - reference

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@ -2,7 +2,9 @@ name: bowtie2_align
description: Align reads to a reference genome using bowtie2 description: Align reads to a reference genome using bowtie2
keywords: keywords:
- align - align
- map
- fasta - fasta
- fastq
- genome - genome
- reference - reference
tools: tools:

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name: expansionhunter name: expansionhunter
description: write your description here description: Estimate repeat sizes using NGS data
keywords: keywords:
- STR - STR
- repeat_expansions - repeat_expansions

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@ -1,7 +1,9 @@
name: fastani name: fastani
description: write your description here description: Alignment-free computation of average nucleotide Identity (ANI)
keywords: keywords:
- fastani - genome
- fasta
- ANI
tools: tools:
- fastani: - fastani:
description: FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI). description: FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).

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@ -1,5 +1,5 @@
name: gatk4_gatherbqsrreports name: gatk4_gatherbqsrreports
description: write your description here description: Gathers scattered BQSR recalibration reports into a single file
keywords: keywords:
- gatk4 - gatk4
- gatk4_gatherbqsrreports - gatk4_gatherbqsrreports

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name: samtools_ampliconclip name: samtools_ampliconclip
description: write your description here description: Clips read alignments where they match BED file defined regions
keywords: keywords:
- amplicon - amplicon
- clipping - clipping
- ampliconclip - ampliconclip
- samtools ampliconclip
- samtools - samtools
tools: tools:
- samtools: - samtools: