mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-21 18:58:16 +00:00
Improve descriptions for modules with missing
Description and keywords Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
This commit is contained in:
parent
5138acca09
commit
848ee9a215
10 changed files with 18 additions and 10 deletions
|
@ -1,9 +1,10 @@
|
||||||
name: bbmap_align
|
name: bbmap_align
|
||||||
description: write your description here
|
description: Align short or PacBio reads to a reference genome using BBMap
|
||||||
keywords:
|
keywords:
|
||||||
- align
|
- align
|
||||||
- map
|
- map
|
||||||
- fasta
|
- fasta
|
||||||
|
- fastq
|
||||||
- genome
|
- genome
|
||||||
- reference
|
- reference
|
||||||
tools:
|
tools:
|
||||||
|
|
|
@ -4,6 +4,7 @@ keywords:
|
||||||
- trimming
|
- trimming
|
||||||
- adapter trimming
|
- adapter trimming
|
||||||
- quality trimming
|
- quality trimming
|
||||||
|
- fastq
|
||||||
tools:
|
tools:
|
||||||
- bbmap:
|
- bbmap:
|
||||||
description: BBMap is a short read aligner, as well as various other bioinformatic tools.
|
description: BBMap is a short read aligner, as well as various other bioinformatic tools.
|
||||||
|
|
|
@ -1,8 +1,9 @@
|
||||||
name: bbmap_bbsplit
|
name: bbmap_bbsplit
|
||||||
description: write your description here
|
description: Split sequencing reads by mapping them to multiple references simultaneously
|
||||||
keywords:
|
keywords:
|
||||||
- align
|
- align
|
||||||
- map
|
- map
|
||||||
|
- fastq
|
||||||
- genome
|
- genome
|
||||||
- reference
|
- reference
|
||||||
tools:
|
tools:
|
||||||
|
|
|
@ -1,7 +1,7 @@
|
||||||
name: bbmap_index
|
name: bbmap_index
|
||||||
description: This module calls bbmap.sh to create an index from a fasta file, ready to be used by bbmap.sh in mapping mode.
|
description: Creates an index from a fasta file, ready to be used by bbmap.sh in mapping mode.
|
||||||
keywords:
|
keywords:
|
||||||
- mapping
|
- map
|
||||||
- index
|
- index
|
||||||
- fasta
|
- fasta
|
||||||
tools:
|
tools:
|
||||||
|
|
|
@ -2,6 +2,8 @@ name: bowtie_align
|
||||||
description: Align reads to a reference genome using bowtie
|
description: Align reads to a reference genome using bowtie
|
||||||
keywords:
|
keywords:
|
||||||
- align
|
- align
|
||||||
|
- map
|
||||||
|
- fastq
|
||||||
- fasta
|
- fasta
|
||||||
- genome
|
- genome
|
||||||
- reference
|
- reference
|
||||||
|
|
|
@ -2,7 +2,9 @@ name: bowtie2_align
|
||||||
description: Align reads to a reference genome using bowtie2
|
description: Align reads to a reference genome using bowtie2
|
||||||
keywords:
|
keywords:
|
||||||
- align
|
- align
|
||||||
|
- map
|
||||||
- fasta
|
- fasta
|
||||||
|
- fastq
|
||||||
- genome
|
- genome
|
||||||
- reference
|
- reference
|
||||||
tools:
|
tools:
|
||||||
|
|
|
@ -1,5 +1,5 @@
|
||||||
name: expansionhunter
|
name: expansionhunter
|
||||||
description: write your description here
|
description: Estimate repeat sizes using NGS data
|
||||||
keywords:
|
keywords:
|
||||||
- STR
|
- STR
|
||||||
- repeat_expansions
|
- repeat_expansions
|
||||||
|
|
|
@ -1,7 +1,9 @@
|
||||||
name: fastani
|
name: fastani
|
||||||
description: write your description here
|
description: Alignment-free computation of average nucleotide Identity (ANI)
|
||||||
keywords:
|
keywords:
|
||||||
- fastani
|
- genome
|
||||||
|
- fasta
|
||||||
|
- ANI
|
||||||
tools:
|
tools:
|
||||||
- fastani:
|
- fastani:
|
||||||
description: FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).
|
description: FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).
|
||||||
|
|
|
@ -1,5 +1,5 @@
|
||||||
name: gatk4_gatherbqsrreports
|
name: gatk4_gatherbqsrreports
|
||||||
description: write your description here
|
description: Gathers scattered BQSR recalibration reports into a single file
|
||||||
keywords:
|
keywords:
|
||||||
- gatk4
|
- gatk4
|
||||||
- gatk4_gatherbqsrreports
|
- gatk4_gatherbqsrreports
|
||||||
|
|
|
@ -1,10 +1,9 @@
|
||||||
name: samtools_ampliconclip
|
name: samtools_ampliconclip
|
||||||
description: write your description here
|
description: Clips read alignments where they match BED file defined regions
|
||||||
keywords:
|
keywords:
|
||||||
- amplicon
|
- amplicon
|
||||||
- clipping
|
- clipping
|
||||||
- ampliconclip
|
- ampliconclip
|
||||||
- samtools ampliconclip
|
|
||||||
- samtools
|
- samtools
|
||||||
tools:
|
tools:
|
||||||
- samtools:
|
- samtools:
|
||||||
|
|
Loading…
Reference in a new issue