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Update main.nf
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@ -11,8 +11,7 @@ process MANTA_SOMATIC {
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tuple val(meta), path(input_normal), path(input_index_normal), path(input_tumor), path(input_index_tumor)
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path fasta
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path fai
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path target_bed
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path target_bed_tbi
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tuple path(target_bed), path(target_bed_tbi)
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output:
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tuple val(meta), path("*.candidate_small_indels.vcf.gz") , emit: candidate_small_indels_vcf
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