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update krona module

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add "$args" to the module
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Simone Carpanzano 2022-04-27 22:43:31 +02:00 committed by GitHub
parent b59713e623
commit a5e7943f2b
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1 changed files with 3 additions and 1 deletions
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4
modules/krona/kronadb/main.nf
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@ -18,7 +18,9 @@ process KRONA_KRONADB {
script:
def args = task.ext.args ?: ''
"""
ktUpdateTaxonomy.sh taxonomy
ktUpdateTaxonomy.sh \\
$args \\
taxonomy
cat <<-END_VERSIONS > versions.yml
"${task.process}":