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Delete tests/software/phantompeakqualtools directory

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sruthipsuresh 2021-01-13 21:23:02 -06:00 committed by GitHub
parent 7c88cf4f67
commit a66618be98
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12
tests/software/phantompeakqualtools/main.nf
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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { PHANTOMPEAKQUALTOOLS } from '../../../software/phantompeakqualtools/main.nf' addParams( options: [:] )
workflow test_phantompeakqualtools {
def input = []
input = [ [ id:'test', single_end:true ], // meta map
[ file("${launchDir}/tests/data/bam/test.single_end.sorted.bam", checkIfExists: true) ] ]
PHANTOMPEAKQUALTOOLS ( input )
}

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tests/software/phantompeakqualtools/test.yml
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- name: Run phantompeakqualtools test workflow
command: nextflow run ./tests/software/phantompeakqualtools/ -profile docker -entry test_phantompeakqualtools -c tests/config/nextflow.config
tags:
- phantompeakqualtools
files:
- path: output/phantompeakqualtools/test.spp.pdf
- path: output/phantompeakqualtools/test.spp.Rdata
- path: output/phantompeakqualtools/test.spp.out
md5sum: c18220e8082e695995edecc99235ec85