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Fix output files
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1 changed files with 2 additions and 10 deletions
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@ -51,18 +51,10 @@ output:
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- fasta:
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- bam:
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type: file
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description: iVar generated consensus sequence
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description: iVar generated trimmed bam file (unsorted)
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pattern: "*.fa"
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- qual:
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type: file
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description: iVar generated quality file
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pattern: "*.qual.txt"
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- mpileup:
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type: file
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description: mpileup output from samtools mpileup [OPTIONAL]
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pattern: "*.mpileup"
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- version:
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type: file
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description: File containing software version
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