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Update software/bcftools/merge/main.nf

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Harshil Patel 2021-02-12 23:16:52 +00:00 committed by GitHub
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software/bcftools/merge/main.nf
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@ -28,7 +28,7 @@ process BCFTOOLS_MERGE {
def software = getSoftwareName(task.process) def software = getSoftwareName(task.process)
prefix = options.suffix ? "${meta.id}${options.suffix}" : "${meta.id}" prefix = options.suffix ? "${meta.id}${options.suffix}" : "${meta.id}"
""" """
bcftools merge -Oz\\ bcftools merge -Oz \\
--output ${prefix}.vcf.gz \\ --output ${prefix}.vcf.gz \\
$options.args \\ $options.args \\
*.vcf.gz *.vcf.gz