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Update software version command (#269)

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Harshil Patel 2021-03-15 12:21:21 +00:00 committed by GitHub
parent 572abb00b3
commit d9396adbdf
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3 changed files with 3 additions and 3 deletions
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2
software/ivar/consensus/main.nf
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@ -42,6 +42,6 @@ process IVAR_CONSENSUS {
$options.args \\
-p $prefix
ivar version | head -n1 2>&1 | sed 's/^.*iVar version //g' > ${software}.version.txt
echo \$(ivar version 2>&1) | sed 's/^.*iVar version //; s/ .*\$//' > ${software}.version.txt
"""
}

2
software/ivar/trim/main.nf
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@ -38,6 +38,6 @@ process IVAR_TRIM {
-p $prefix \\
> ${prefix}.ivar.log
ivar version | head -n1 2>&1 | sed 's/^.*iVar version //g' > ${software}.version.txt
echo \$(ivar version 2>&1) | sed 's/^.*iVar version //; s/ .*\$//' > ${software}.version.txt
"""
}

2
software/ivar/variants/main.nf
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@ -45,6 +45,6 @@ process IVAR_VARIANTS {
-r $fasta \\
-p $prefix
ivar version | head -n1 2>&1 | sed 's/^.*iVar version //g' > ${software}.version.txt
echo \$(ivar version 2>&1) | sed 's/^.*iVar version //; s/ .*\$//' > ${software}.version.txt
"""
}