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more generic name because of multiple extension (#1880)

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Maxime U. Garcia 2022-07-14 11:42:00 +02:00 committed by GitHub
parent 1de4bd46b7
commit f48a24770e
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1 changed files with 2 additions and 2 deletions
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modules/samtools/stats/main.nf
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@ -8,7 +8,7 @@ process SAMTOOLS_STATS {
'quay.io/biocontainers/samtools:1.15.1--h1170115_0' }" 'quay.io/biocontainers/samtools:1.15.1--h1170115_0' }"
input: input:
tuple val(meta), path(bam), path(bai) tuple val(meta), path(input), path(input_index)
path fasta path fasta
output: output:
@ -27,7 +27,7 @@ process SAMTOOLS_STATS {
stats \\ stats \\
--threads ${task.cpus-1} \\ --threads ${task.cpus-1} \\
${reference} \\ ${reference} \\
${bam} \\ ${input} \\
> ${prefix}.stats > ${prefix}.stats
cat <<-END_VERSIONS > versions.yml cat <<-END_VERSIONS > versions.yml