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Merge pull request #1692 from SusiJo/cnvkit/reference
Changed tag of module
This commit is contained in:
commit
f9aa1e0bdb
1 changed files with 6 additions and 7 deletions
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@ -1,5 +1,5 @@
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process CNVKIT_REFERENCE {
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process CNVKIT_REFERENCE {
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tag "$reference"
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tag "$fasta"
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label 'process_low'
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label 'process_low'
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conda (params.enable_conda ? "bioconda::cnvkit=0.9.9" : null)
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conda (params.enable_conda ? "bioconda::cnvkit=0.9.9" : null)
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@ -13,15 +13,14 @@ process CNVKIT_REFERENCE {
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path antitargets
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path antitargets
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output:
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output:
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path("*.cnn") , emit: cnn
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path "*.cnn" , emit: cnn
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path "versions.yml" , emit: versions
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path "versions.yml", emit: versions
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when:
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when:
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task.ext.when == null || task.ext.when
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task.ext.when == null || task.ext.when
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script:
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script:
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def args = task.ext.args ?: ''
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def args = task.ext.args ?: ''
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"""
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"""
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cnvkit.py \\
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cnvkit.py \\
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reference \\
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reference \\
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