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Update md5sums

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This commit is contained in:
Rike 2022-05-12 16:07:12 +02:00
parent fd7ee6799a
commit fef5434c4c
6 changed files with 17 additions and 17 deletions
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6
tests/modules/gatk4/applybqsr/test.yml
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@ -5,7 +5,7 @@
- gatk4/applybqsr - gatk4/applybqsr
files: files:
- path: output/gatk4/test.bam - path: output/gatk4/test.bam
md5sum: d088422be886dc8507ff97fcc7dd968a md5sum: e11b7eaf2034740a953626518e3c3d6e
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml
- name: gatk4 applybqsr test_gatk4_applybqsr_intervals - name: gatk4 applybqsr test_gatk4_applybqsr_intervals
@ -15,7 +15,7 @@
- gatk4/applybqsr - gatk4/applybqsr
files: files:
- path: output/gatk4/test.bam - path: output/gatk4/test.bam
md5sum: 4bfa18d651abd945e240b05e70107716 md5sum: e9e9aa753c106e43f936ad573e23d2e6
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml
- name: gatk4 applybqsr test_gatk4_applybqsr_cram - name: gatk4 applybqsr test_gatk4_applybqsr_cram
@ -25,5 +25,5 @@
- gatk4/applybqsr - gatk4/applybqsr
files: files:
- path: output/gatk4/test.cram - path: output/gatk4/test.cram
md5sum: 2e0bca197af4f043a4a85152e6edbe04 md5sum: bca9d234a5d484ce2a6f4826ca2ea308
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml

6
tests/modules/gatk4/applybqsrspark/test.yml
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@ -5,7 +5,7 @@
- gatk4/applybqsrspark - gatk4/applybqsrspark
files: files:
- path: output/gatk4/test.bam - path: output/gatk4/test.bam
md5sum: d088422be886dc8507ff97fcc7dd968a md5sum: 1901c819fcba0fdd5e2482e6dc8285ef
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml
- name: gatk4 applybqsr test_gatk4_applybqsr_spark_intervals - name: gatk4 applybqsr test_gatk4_applybqsr_spark_intervals
@ -15,7 +15,7 @@
- gatk4/applybqsrspark - gatk4/applybqsrspark
files: files:
- path: output/gatk4/test.bam - path: output/gatk4/test.bam
md5sum: 4bfa18d651abd945e240b05e70107716 md5sum: 2ca2446f0125890280056fd7da822732
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml
- name: gatk4 applybqsr test_gatk4_applybqsr_spark_cram - name: gatk4 applybqsr test_gatk4_applybqsr_spark_cram
@ -25,5 +25,5 @@
- gatk4/applybqsrspark - gatk4/applybqsrspark
files: files:
- path: output/gatk4/test.cram - path: output/gatk4/test.cram
md5sum: 2e0bca197af4f043a4a85152e6edbe04 md5sum: 60f7c822a9f2833e11eb7bfd16e4421f
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml

8
tests/modules/gatk4/intervallisttools/test.yml
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@ -7,11 +7,11 @@
- path: output/gatk4/test.interval_list - path: output/gatk4/test.interval_list
md5sum: e51101c9357fb2d59fd30e370eefa39c md5sum: e51101c9357fb2d59fd30e370eefa39c
- path: output/gatk4/test_split/temp_0001_of_6/1scattered.interval_list - path: output/gatk4/test_split/temp_0001_of_6/1scattered.interval_list
md5sum: b8ba8a387200df76a0d1c577626dc265 md5sum: 39385d38ac6cb7c05190026fc3b81411
- path: output/gatk4/test_split/temp_0002_of_6/2scattered.interval_list - path: output/gatk4/test_split/temp_0002_of_6/2scattered.interval_list
md5sum: 0728d164666d9264ef442a493e008dee md5sum: 59f1978c5f4ef3fce3b110816283d9f5
- path: output/gatk4/test_split/temp_0003_of_6/3scattered.interval_list - path: output/gatk4/test_split/temp_0003_of_6/3scattered.interval_list
md5sum: 55da0f3c69504148f4e7002a0e072cfe md5sum: 709fe81bfcf700bd80d96c62a71629fd
- path: output/gatk4/test_split/temp_0004_of_6/4scattered.interval_list - path: output/gatk4/test_split/temp_0004_of_6/4scattered.interval_list
md5sum: d29ca4447f32547f2936567fa902796a md5sum: c24044490cfedbcba61dbc646d3aa570
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml

6
tests/modules/gatk4/markduplicates/test.yml
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@ -5,9 +5,9 @@
- gatk4/markduplicates - gatk4/markduplicates
files: files:
- path: output/gatk4/test.bai - path: output/gatk4/test.bai
md5sum: e9c125e82553209933883b4fe2b8d7c2 md5sum: c8f7a9e426c768577f88f59cb1336bf3
- path: output/gatk4/test.bam - path: output/gatk4/test.bam
md5sum: 2efd50b2e6b7fd9bdf242cd9e266cfa9 md5sum: 58533ddab47f7ac07f7b10e7f4aac234
- path: output/gatk4/test.metrics - path: output/gatk4/test.metrics
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml
@ -20,6 +20,6 @@
- path: output/gatk4/test.bai - path: output/gatk4/test.bai
md5sum: bad71df9c876e72a5bc0a3e0fd755f92 md5sum: bad71df9c876e72a5bc0a3e0fd755f92
- path: output/gatk4/test.bam - path: output/gatk4/test.bam
md5sum: 8187febc6108ffef7f907e89b9c091a4 md5sum: 112580c24b43331950f24f9adea30788
- path: output/gatk4/test.metrics - path: output/gatk4/test.metrics
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml

4
tests/modules/gatk4/splitncigarreads/test.yml
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@ -5,7 +5,7 @@
- gatk4/splitncigarreads - gatk4/splitncigarreads
files: files:
- path: output/gatk4/test.bam - path: output/gatk4/test.bam
md5sum: 436d8e31285c6b588bdd1c7f1d07f6f2 md5sum: 37e5dbce8692b54c3292b539c91dfbd7
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml
- name: gatk4 splitncigarreads test_gatk4_splitncigarreads_intervals - name: gatk4 splitncigarreads test_gatk4_splitncigarreads_intervals
command: nextflow run tests/modules/gatk4/splitncigarreads -entry test_gatk4_splitncigarreads_intervals -c tests/config/nextflow.config command: nextflow run tests/modules/gatk4/splitncigarreads -entry test_gatk4_splitncigarreads_intervals -c tests/config/nextflow.config
@ -14,5 +14,5 @@
- gatk4/splitncigarreads - gatk4/splitncigarreads
files: files:
- path: output/gatk4/test.bam - path: output/gatk4/test.bam
md5sum: cd56e3225950f519fd47164cca60a0bb md5sum: e5cd2fd1822298a9bf7bc8b8d42146af
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml

4
tests/modules/gatk4/variantrecalibrator/test.yml
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@ -9,7 +9,7 @@
- "#CHROM POS ID REF ALT QUAL FILTER INFO" - "#CHROM POS ID REF ALT QUAL FILTER INFO"
- path: output/gatk4/test.recal.idx - path: output/gatk4/test.recal.idx
- path: output/gatk4/test.tranches - path: output/gatk4/test.tranches
md5sum: d238e97bf996863969dac7751e345549 md5sum: c029e52fd63a893e1154cc9144a19eeb
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml
- name: gatk4 variantrecalibrator test_gatk4_variantrecalibrator_allele_specific - name: gatk4 variantrecalibrator test_gatk4_variantrecalibrator_allele_specific
@ -23,5 +23,5 @@
- "#CHROM POS ID REF ALT QUAL FILTER INFO" - "#CHROM POS ID REF ALT QUAL FILTER INFO"
- path: output/gatk4/test.recal.idx - path: output/gatk4/test.recal.idx
- path: output/gatk4/test.tranches - path: output/gatk4/test.tranches
md5sum: 444438d46716593634a6817958099292 md5sum: ad52fa69325c758f458a30ee5b43d6b5
- path: output/gatk4/versions.yml - path: output/gatk4/versions.yml