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Update modules/bowtie2/align/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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@ -48,7 +48,7 @@ process BOWTIE2_ALIGN {
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-x \$INDEX \\
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${reads_args} \\
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--threads $task.cpus \\
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${unaligned} \\
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$unaligned \\
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$args \\
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2> ${prefix}.bowtie2.log \\
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| ${samtools}
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