18 commits

Author	SHA1	Message	Date
Harshil Patel	acb1a12a56	Re-organise all test data (#354) ... * Re-organise all test data * Fix ECLint * Fix ECLint agaaainn * Now is not the time EClint	2021-03-24 09:53:41 +00:00
Kevin Menden	a552d97849	Exchange VCF data by sarscov2 data (#261) ... * added sarscov2 vcf data; adjusted bcftools tests * updated README.md * deleted old VCF files; fixed mergevcfs * fixed tabix	2021-03-09 10:04:08 +01:00
JoseEspinosa	e9d90007c5	Adding arguments to make md5 hashes stable	2021-02-23 19:39:24 +01:00
JoseEspinosa	4b3c86ed9f	Add tests for bcftools-mpileup	2021-02-23 19:05:57 +01:00
Harshil Patel	412172cda6	Merge pull request #180 from MaxUlysse/master_tabix_bgzip ... Replace bcftools/bgzip by tabix/bgzip	2021-02-16 23:32:23 +00:00
MaxUlysse	6a147b8aaa	chores: replace bcftools/bgzip by tabix/bgzip cf #179	2021-02-16 19:11:36 +01:00
MaxUlysse	5a144d6213	fix: merge bcftools/tabix and htslib/tabix tests into tabix/tabix	2021-02-16 18:35:32 +01:00
JoseEspinosa	5313698705	Add bcftools merge module	2021-02-13 00:08:57 +01:00
Harshil Patel	0f6830f7cc	Update tests/software/bcftools/consensus/main.nf	2021-02-08 21:41:24 +00:00
JoseEspinosa	f8882de456	Renaming test ymls just to: software tool	2021-02-08 21:56:53 +01:00
JoseEspinosa	4fa38ebb7a	Separate test data to break dependencies between bcftools modules tests	2021-02-08 16:51:21 +01:00
JoseEspinosa	83cc25860d	Rearranging tests to test each module separately	2021-02-08 15:16:51 +01:00
JoseEspinosa	26829497d5	Fixing typo on path for md5 check	2021-02-02 12:19:57 +01:00
JoseEspinosa	e7f15feccf	Adding --no-version to bcftools_isec for tests md5 check	2021-02-02 11:00:02 +01:00
JoseEspinosa	3a40ec5664	Adding bcftools_isec taking a path with several vcfs and its tests	2021-02-02 10:50:45 +01:00
JoseEspinosa	8e4764b8ed	bcftools_filter adding argument to test to enable md5 check	2021-02-02 10:19:34 +01:00
JoseEspinosa	c25f8f0f6c	Fixing tests	2021-02-02 09:57:55 +01:00
JoseEspinosa	a3ce63c79c	Adding tests for bcftools	2021-02-02 09:14:00 +01:00