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Author SHA1 Message Date
tamuanand
57b43ed3de
New module - BBMap clumpify (#1978)
* Update meta.yml by fixing html pattern expected 

Fixed html pattern typo:

Before: pattern: "*.thml"

After fix: pattern: "*.html"

* main.nf for bbmap_clumpify

* meta.yml for bbmap_clumpify

* bbmap/clumpify via Gitpod and @mahesh-panchal guide

* small changes to tests

* explicit mention of output file pattern - *.clumped.fastq.gz

* Update modules/bbmap/clumpify/main.nf

Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>

* Update modules/bbmap/clumpify/main.nf

Accepted @mahesh-panchal suggestions

Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>

Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>
Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-09-05 08:23:08 +02:00