Sébastien Guizard
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d3369789da
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New module: gstama/merge (#813)
* 👌 IMPROVE: Add some pacbio test files
* 🐛 FIX: Add Pacbio index to test_data.config
* 👌 IMPROVE: Re add 10000 data test
* 👌 IMPROVE: Add some pbindex
* 🐛 FIX: Add pbi extension to files
* 📦 NEW: Add galgal6 chr30 test data
* 📦 NEW: Add bamtools module
* 👌 IMPROVE: ignore test data
* 👌 IMPROVE : add test bed files
* 📦 NEW: Add gstama/merge module
* 🐛 FIX: Change process label
* 👌 IMPROVE: do not merge empty bed
* 🐛 FIX: Change 0 lines files detection
* 🐛 FIX: replace spaces by tab
* 🐛 FIX: Remove tuple for report channel and add version output channel
* 👌 IMPROVE: Update to last templates version
* 👌 IMPROVE: Update module to last template version
* 👌 IMPROVE: Final version of test datasets config
* 👌 IMPROVE: Update test
* 👌 IMPROVE: Remove useless index + Fix Typos
* 👌 IMPROVE: Fix Typos
* 👌 IMPROVE: Updates + clean code
- Update to last versions.yml file
- Better output channels
- Update meta.yml
* 👌 IMPROVE: Correct typo
* 👌 IMPROVE: Remove included filelist creation and add an input channel
* 🐛 FIX: Correct typo
* 👌 IMPROVE: Add filelist file
* 🐛 FIX: tama_merge.py emit a version number
* Update modules/gstama/merge/meta.yml
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
* 👌 IMPROVE: Update meta.yml
* Update main.nf
* Apply suggestions from code review
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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2021-10-23 19:00:39 +01:00 |
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