millironx/nf-core_modules
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3406 commits 30 branches 0 tags 142 MiB
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19 commits

Author SHA1 Message Date
Mahesh Binzer-Panchal
ebc466caac
Update busco input type (#2135) 
* Update busco input type

* Fix singularity test
 2022-09-29 21:35:51 +01:00
Mahesh Binzer-Panchal
89a84538be
Update busco to v5.4.3 and tar small files (#1970) 
* Update busco to v5.4.3 and tar small files

* Fix file contain strings

* Swap md5sums to contains for variable files
 2022-08-30 10:25:01 +02:00
Mahesh Binzer-Panchal
9fa6b6c1fc Update meta.yml 2022-05-06 11:56:43 +00:00
Mahesh Binzer-Panchal
35c5828f43 Add --auto-lineage option and remove single_end 
Co-authored-by: Jill V. Hagey, PhD <jvhagey@gmail.com>
 2022-05-06 11:48:21 +00:00
Harshil Patel
1289626cc9
Update modules/busco/main.nf 2022-05-05 16:09:45 +01:00
Mahesh Binzer-Panchal
2542ae1823
Update modules/busco/main.nf 
Co-authored-by: Sateesh Peri <33637490+sateeshperi@users.noreply.github.com>
 2022-05-05 16:33:32 +02:00
Mahesh Binzer-Panchal
865ad3447a Update meta.yml output files 2022-05-05 08:23:54 +00:00
Mahesh Binzer-Panchal
73a8df9522 Fix no genes found test and update test.yml 2022-05-04 11:52:42 +00:00
Mahesh Binzer-Panchal
8df20218bf Add more tests and capture summaries 
Co-authored-by: Jill V. Hagey, PhD <jvhagey@gmail.com>
 2022-05-04 09:22:43 +00:00
Jill V. Hagey, PhD
f02cd618b8
Update meta.yml 2022-05-03 10:09:19 -04:00
Mahesh Binzer-Panchal
1c54c0b1ae
Apply suggestions from code review 
Co-authored-by: Matthieu Muffato <cortexspam-github@yahoo.fr>
 2022-05-03 16:02:11 +02:00
Matthieu Muffato
6351ec745e
Update contributor list 2022-05-03 14:56:27 +01:00
Matthieu Muffato
4be754b008
It's a file, not a directory 2022-05-03 14:53:17 +01:00
Mahesh Binzer-Panchal
57db28386e Support batch fasta analysis 2022-05-03 13:26:49 +00:00
Mahesh Binzer-Panchal
012f085378 Prettier 2022-05-03 09:19:39 +00:00
Mahesh Binzer-Panchal
9eff38ff94 Update meta.yml 2022-05-03 09:15:45 +00:00
Mahesh Binzer-Panchal
9a72548ee1 Update busco module 2022-05-03 08:42:56 +00:00
Priyanka Surana
3e6be50600 Adjusted Augustus Config Path settings. Suggested by @mahesh-panchal 2022-02-25 13:26:23 +00:00
Priyanka Surana
b412e6dabc Busco module commit with nf-core v2.2 c1 2022-01-27 14:36:18 +00:00