15 commits

Author	SHA1	Message	Date
Harshil Patel	dce27b8102	Update functions.nf to be more flexible for publishing by meta keys (#423) ... * Update functions.nf * Replace saveAs line in module main script * Add spacing for ECLint	2021-04-09 17:23:56 +01:00
Patrick Hüther	8a44258548	remove params section from meta.yml (#282)	2021-03-19 13:16:50 +01:00
Jose Espinosa-Carrasco	572abb00b3	Remove def from module options definition in main (#270) ... * Remove def from module options definition in main * Fix bismark_deduplicate tests * Fix bwameth_align tests * Fixing gatk4 conda tests ("=" instead of ':' in build id) * Same as previous commit (Fix gatk4 test) * Fix qualimap bamqc test (no md5 check for pngs) * Fix seqkit split2 tests. Changed to new test data * Fix samtools tests. Some were missing initOptions include * Removing TOOL SUBTOOL template module since now it is included on tools repo	2021-03-15 12:16:43 +00:00
drpatelh	dcc580e4fb	Remove Conda build ids for all modules	2021-02-16 23:58:23 +00:00
drpatelh	423144808c	seacr - add build info for mulled container	2021-02-03 11:05:10 +00:00
Chris Cheshire	f6432d3c9c	seacr | updated whitespace	2021-01-05 10:22:37 +00:00
Chris Cheshire	d9818cf3ab	seacr | updated whitespace	2021-01-05 10:21:32 +00:00
Chris Cheshire	6d34e6964f	seacr | added new line at end	2021-01-05 10:20:13 +00:00
Chris Cheshire	e25edbf7b8	seacr | Added meta file	2021-01-05 10:18:11 +00:00
Chris Cheshire	c110088b5e	Updated line endings	2021-01-05 09:56:15 +00:00
Chris Cheshire	37840b3855	seacr | updated trailing whitespace	2021-01-05 09:54:44 +00:00
Chris Cheshire	9c00d1722c	seacr | PR review changes	2021-01-05 09:50:47 +00:00
Chris Cheshire	b24834dfce	seacr | local testing implimented	2020-12-17 14:20:24 +00:00
Chris Cheshire	74e7b5385f	seacr | Added main process structure	2020-12-17 13:54:48 +00:00
Chris Cheshire	3ff2b558e0	seacr | Added callpeak skeleton	2020-12-16 11:05:06 +00:00