8 commits

Author	SHA1	Message	Date
jasmezz	6a9f2077cf	Fix unbound variable crash	2022-05-02 16:41:59 +02:00
jasmezz	0fc352188b	Fix conda antismash path	2022-05-02 14:40:35 +02:00
Jasmin F	5cd517e759	Apply suggestions from code review ... Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-05-02 14:31:40 +02:00
Jasmin F	c740853874	Antismash db output patch 1 (#3) ... * Update main.nf * Update meta.yml * Update test.yml	2022-04-28 16:42:44 +02:00
Jasmin F	31547edc1e	Update tool name	2022-04-27 10:14:14 +02:00
Jasmin F	d79433dcac	Apply suggestions from code review ... Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-04-27 10:08:07 +02:00
jasmezz	134272c7ee	Add missing container folders as output channels	2022-04-26 17:04:57 +02:00
Jasmin F	d07d270743	Antismashlite download databases (#1426) ... * Create module antismashlitedownloaddatabases * Corrected user-specification of database directory * Updated test.yml * Apply suggestions from code review Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Fix typo in test.yml * Feed database files via docker/singularity mount) * Add external db file mounts to the containers * Fixed docker command in main.nf * Apply prettier * Apply prettier and add PWD * Add more output to test.yml * Add more output paths to test.yml * Fixed test.yml * Apply suggestions from code review Add documentation of why we need to mount files to the containers. Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Fix code linting errors (remove trailing whitespaces) * Fix code linting error (remove trailing whitespace) * Fix errors from Prettier linting Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-04-21 10:38:17 +02:00