7 commits

Author	SHA1	Message	Date
James A. Fellows Yates	90aef30f43	Set process label to process_single for modules with no task.cpus usage (#2076) ... * Set process label to `process_single` for modules with no `task.cpus` usage * Fix tests of 'borked' modules * prettier * More modules are single-threaded and can use process_single * Adding process_single to hmmer/esl* modules * Fix failing tests * Prettier Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk> Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>	2022-09-19 11:54:47 +02:00
James A. Fellows Yates	70f7f07a37	Apply suggestions from code review ... Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>	2022-06-09 08:33:37 +02:00
James Fellows Yates	939653a47e	Changes after code review	2022-06-09 08:26:04 +02:00
James Fellows Yates	4d7afa21e2	Add GATK indelrealigner tests	2022-06-08 21:14:08 +02:00
James Fellows Yates	de88adc926	Standardise parameters (no tests yet until realigntarget creator ready)	2022-06-02 20:35:34 +02:00
James Fellows Yates	599b264280	Standaridse parameters	2022-06-02 20:27:16 +02:00
James Fellows Yates	7ffe98ac8b	Add gatk/indelrealigner	2022-05-30 21:12:21 +02:00