75 commits

Author	SHA1	Message	Date
drpatelh	c92fe8701a	Add docs about docs	2021-02-08 00:53:32 +00:00
drpatelh	41dfaf2a19	Use Nextflow comments	2021-02-08 00:44:45 +00:00
drpatelh	56752b90f5	Fix indents	2021-02-08 00:40:36 +00:00
drpatelh	a8efd112b9	Add docs about finding and adding containers	2021-02-08 00:35:50 +00:00
drpatelh	d4b278eb65	Update docs	2021-02-08 00:01:48 +00:00
drpatelh	9cb958ca25	Update commands for pytest	2021-02-07 23:50:21 +00:00
drpatelh	07f62a76c5	Re-word CI tests	2021-02-07 23:40:26 +00:00
drpatelh	6bbb71a022	Update link to tests template	2021-02-07 23:26:54 +00:00
drpatelh	83a50d8ae0	Rename SOFTWARE_TOOL to TOOL_SUBTOOL	2021-02-07 23:20:53 +00:00
Edmund Miller	e51d0bdf5e	Apply suggestions from code review ... Co-authored-by: Kevin Menden <kevin.menden@t-online.de>	2021-02-05 09:26:45 -06:00
Edmund Miller	f065476d36	docs: Add testing documentation	2021-02-04 16:00:31 -06:00
drpatelh	e397c64c69	Add explicit Nextflow version to README	2020-12-14 00:08:38 +00:00
drpatelh	99f5d49d37	Update README	2020-10-20 11:04:12 +01:00
drpatelh	5eb735f561	Update README	2020-10-20 11:02:46 +01:00
drpatelh	7e2c7b1b41	Update README	2020-10-15 11:02:04 +01:00
drpatelh	d63982b41e	Update README	2020-08-07 11:38:48 +01:00
drpatelh	fee1687215	Add template example to README	2020-08-07 11:30:43 +01:00
drpatelh	6255d9b00c	Fix markdownlint	2020-08-07 10:10:12 +01:00
drpatelh	268c56c20d	Update README	2020-08-07 09:31:54 +01:00
drpatelh	a0ca7b1738	Update meta.yml link	2020-08-06 16:30:32 +01:00
drpatelh	c98b32dfa8	Add link to functions file	2020-08-06 16:26:57 +01:00
drpatelh	70607cf5e2	Adjust spacing	2020-08-06 16:19:31 +01:00
drpatelh	b244160e78	Fix indent	2020-08-06 16:18:16 +01:00
drpatelh	bca0d598bf	Add more links	2020-08-06 16:14:36 +01:00
drpatelh	28143c32fd	Add links	2020-08-06 16:12:06 +01:00
drpatelh	5e32585acf	Fix markdownlint	2020-08-06 16:08:52 +01:00
drpatelh	bd137343f0	Remove spaces	2020-08-06 16:07:10 +01:00
drpatelh	14fcbc52f1	Update testing section	2020-08-06 16:04:19 +01:00
drpatelh	b3e3e43089	Update README	2020-08-06 15:34:44 +01:00
drpatelh	e2b47a6fa3	Add software requirements section	2020-08-06 15:22:32 +01:00
drpatelh	21efc24299	Re-write requirements	2020-08-06 14:50:09 +01:00
drpatelh	1b294f4249	Add guidelines section	2020-08-06 13:43:19 +01:00
drpatelh	c7c65e3ad0	Reword again	2020-08-06 13:38:09 +01:00
drpatelh	259c4f9634	Reword sentence	2020-08-06 13:36:27 +01:00
drpatelh	f5068c897f	Add example tools	2020-08-06 13:33:16 +01:00
drpatelh	63a2cce2da	Add include section	2020-08-06 13:23:56 +01:00
drpatelh	7b3bc338d4	Add info about GitHub API	2020-08-06 13:04:23 +01:00
drpatelh	154d2b0c08	Add separate bullet	2020-08-06 12:57:53 +01:00
drpatelh	4f82982d04	Truncate console text	2020-08-06 12:55:36 +01:00
drpatelh	9bd5596732	Add citation to TOC	2020-08-06 12:52:55 +01:00
drpatelh	680c58315a	Add citation	2020-08-06 12:52:04 +01:00
drpatelh	9c8d3af66e	Add direct Slack link	2020-08-06 12:46:36 +01:00
drpatelh	3e0c63a0a0	Update badge	2020-08-06 12:42:45 +01:00
drpatelh	3428157910	Add badges	2020-08-06 12:39:33 +01:00
drpatelh	d510854648	Add note about other commands	2020-08-06 12:27:01 +01:00
drpatelh	9142ad7016	Move terminology to bottom	2020-08-06 12:17:24 +01:00
drpatelh	c2f797d820	Update existing pipeline usage	2020-08-06 12:12:40 +01:00
drpatelh	83b61fcccd	Update README	2020-08-06 12:00:24 +01:00
Gregor Sturm	6634a37bfd	Update README.md ... Co-authored-by: Phil Ewels <phil.ewels@scilifelab.se>	2020-07-16 16:48:47 +02:00
Gregor Sturm	f95f234562	Update README.md ... Co-authored-by: Phil Ewels <phil.ewels@scilifelab.se>	2020-07-16 16:48:22 +02:00