James A. Fellows Yates
90aef30f43
Set process label to process_single for modules with no task.cpus usage ( #2076 )
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* Set process label to `process_single` for modules with no `task.cpus` usage
* Fix tests of 'borked' modules
* prettier
* More modules are single-threaded and can use process_single
* Adding process_single to hmmer/esl* modules
* Fix failing tests
* Prettier
Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk>
Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>
2022-09-19 11:54:47 +02:00
2f0b192404
Add KAIJU2KRONA module ( #1800 )
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Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-06-23 16:38:50 +00:00
Sofia Stamouli
538dbac98b
Kaiju2table module ( #1545 )
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* Add kaiju2table module
2022-04-22 11:26:30 +02:00
Sofia Stamouli
8856f127c5
Update input in kaiju_kaiju module ( #1522 )
2022-04-13 14:53:08 +02:00
Tanja Normark
1f483d9203
Add kaiju_kaiju module ( #1448 )
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* Added kaiju_kaiju module
* Update modules/kaiju/kaiju/main.nf
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
* Update modules/kaiju/kaiju/main.nf
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
* Update modules/kaiju/kaiju/meta.yml
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
* Update keywords
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
* Update output file naming
* Update output file naming
* update spacing for lint
* Update input file patterns
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-03-28 14:28:50 +02:00
