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ampliconclip
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Multithreaded samtools commands (#2080)
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2022-09-26 17:44:36 +01:00 |
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bam2fq
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Test --no-name to solve inconsistent checksums
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2022-05-03 15:18:09 +02:00 |
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collate
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samtools collate module (#2078)
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2022-09-21 14:12:59 +01:00 |
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collatefastq
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Add samtools/collatefastq module (#1536)
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2022-04-20 10:05:17 +02:00 |
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convert
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Reduce resource requests (#2021)
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2022-09-07 10:33:05 +02:00 |
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depth
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Multithreaded samtools commands (#2080)
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2022-09-26 17:44:36 +01:00 |
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dict
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Added the samtools/dict module (#1922)
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2022-07-26 22:13:19 +01:00 |
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faidx
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Added the optional .gzi output of "samtools faidx" (#1935)
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2022-09-08 13:35:23 +01:00 |
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fasta
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samtools fasta module (#2128)
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2022-09-29 08:10:44 +01:00 |
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fastq
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Samtools version update (#1507)
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2022-04-11 14:26:28 +02:00 |
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fixmate
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Samtools version update (#1507)
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2022-04-11 14:26:28 +02:00 |
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flagstat
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Fix/samtools flagstat (#1979)
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2022-08-29 13:11:58 +02:00 |
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getrg
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new module: samtools/getrg (#2123)
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2022-09-28 14:00:10 +02:00 |
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idxstats
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Multithreaded samtools commands (#2080)
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2022-09-26 17:44:36 +01:00 |
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index
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Samtools version update (#1507)
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2022-04-11 14:26:28 +02:00 |
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markdup
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samtools markdup module (#2087)
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2022-09-21 15:39:10 +01:00 |
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merge
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bugfix: when there is a single input file, stageAs("?/*) returns the path directly, not in a list (#2114)
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2022-09-28 13:28:52 +01:00 |
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mpileup
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Reduce resource requests (#2021)
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2022-09-07 10:33:05 +02:00 |
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sort
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[samtools] add optional csi output (#2064)
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2022-09-20 21:08:29 +01:00 |
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stats
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fix samtools stats thread usage (#1975)
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2022-08-29 12:05:47 +02:00 |
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view
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add qname feature to samtools/view (#2115)
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2022-09-28 13:04:41 +01:00 |
