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nf-core_modules/subworkflows/nf-core
Harshil Patel b3e322064e
[POC] Get subworkflows working again - bam_stats_samtools (#2097)
* [POC] Get subworkflows working again - bam_stats_samtools

* Comment out aliased anchors

* Add explicit anchor to pytest_modules.yml

* test(subworkflows): Remove anchors

There are two options to get the tests to trigger:

1. Add the module anchors to the subworkflows (less things to update and maintain because we only have to update the module triggers)

2. Add the tags to the pytest workflow spec.

This is option 2.

Co-authored-by: Edmund Miller <edmund.a.miller@protonmail.com>
2 years ago
..
align_bowtie2 Fix formatting in yaml files, add yamllint config (#1279) 2 years ago
annotation update ensemblvep and snpeff modules 2 years ago
bam_qc_picard Update subworkflows/nf-core/bam_qc_picard/main.nf 2 years ago
bam_sort_samtools Fix formatting in yaml files, add yamllint config (#1279) 2 years ago
bam_stats_samtools [POC] Get subworkflows working again - bam_stats_samtools (#2097) 2 years ago
fgbio_create_umi_consensus Fix formatting in yaml files, add yamllint config (#1279) 2 years ago
gatk_create_som_pon Fix formatting in yaml files, add yamllint config (#1279) 2 years ago
gatk_tumor_normal_somatic_variant_calling Fix formatting in yaml files, add yamllint config (#1279) 2 years ago
gatk_tumor_only_somatic_variant_calling Fix formatting in yaml files, add yamllint config (#1279) 2 years ago
homer/groseq feat(homer): Add groseq subworkflow (#1492) 2 years ago
srafastq refactor: rename and update subworkflow 2 years ago