mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 21:53:10 +00:00
3aacd46da2
* backfilled modules with meta.yml that had no license identifier * harmonized BSD license names * whitespace linting at modules/unzip/meta.yml:12 * harmonized software from US NIH-NCBI/NIST to 'US-Government-Work' * Update modules/bcftools/index/meta.yml `bcftools` is dual-licensed, use associative array to allow for multiple licenses Co-authored-by: Michael L Heuer <heuermh@acm.org> Co-authored-by: Michael L Heuer <heuermh@acm.org>
41 lines
1 KiB
YAML
41 lines
1 KiB
YAML
name: cooler_dump
|
||
description: Dump a cooler’s data to a text stream.
|
||
keywords:
|
||
- dump
|
||
tools:
|
||
- cooler:
|
||
description: Sparse binary format for genomic interaction matrices
|
||
homepage: https://cooler.readthedocs.io/en/latest/index.html
|
||
documentation: https://cooler.readthedocs.io/en/latest/index.html
|
||
tool_dev_url: https://github.com/open2c/cooler
|
||
doi: "10.1093/bioinformatics/btz540"
|
||
licence: ['BSD-3-Clause']
|
||
|
||
input:
|
||
- meta:
|
||
type: map
|
||
description: |
|
||
Groovy Map containing sample information
|
||
e.g. [ id:'test', single_end:false ]
|
||
- cool:
|
||
type: file
|
||
description: Path to COOL file
|
||
pattern: "*.{cool,mcool}"
|
||
|
||
output:
|
||
- meta:
|
||
type: map
|
||
description: |
|
||
Groovy Map containing sample information
|
||
e.g. [ id:'test', single_end:false ]
|
||
- versions:
|
||
type: file
|
||
description: File containing software versions
|
||
pattern: "versions.yml"
|
||
- bedpe:
|
||
type: file
|
||
description: Output text file
|
||
pattern: "*.bedpe"
|
||
|
||
authors:
|
||
- "@jianhong"
|