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* Add FastK/Merge * Update modules/fastk/merge/main.nf * Update modules/fastk/merge/meta.yml Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk> Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk>
60 lines
1.6 KiB
YAML
60 lines
1.6 KiB
YAML
name: "fastk_merge"
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description: A tool to merge FastK histograms
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keywords:
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- merge
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- k-mer
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- histogram
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- fastk
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tools:
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- fastk:
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description: "A fast K-mer counter for high-fidelity shotgun datasets"
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homepage: "https://github.com/thegenemyers/FASTK"
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documentation: ""
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tool_dev_url: "https://github.com/thegenemyers/FASTK"
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doi: ""
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licence: "https://github.com/thegenemyers/FASTK/blob/master/LICENSE"
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- fastk_hist:
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type: file
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description: A histogram files from the program FastK
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pattern: "*.hist"
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- fastk_ktab:
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type: file
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description: Histogram ktab files from the program FastK (option -t)
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pattern: "*.ktab*"
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- fastk_prof:
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type: file
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description: Histogram profile files from the program FastK (option -p)
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pattern: "*.{prof,pidx}*"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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- fastk_hist:
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type: file
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description: A histogram files from the program FastK
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pattern: "*.hist"
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- fastk_ktab:
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type: file
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description: Histogram ktab files from the program FastK (option -t)
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pattern: "*.ktab*"
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- fastk_prof:
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type: file
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description: Histogram profile files from the program FastK (option -p)
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pattern: "*.{prof,pidx}*"
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authors:
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- "@mahesh-panchal"
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