nf-core_modules/modules/genmap/mappability/meta.yml
Harshil Patel e937c7950a
Rename software/ directory to modules/ to re-organise module structure (#567)
* Update README

* Rename pytest_software.yml to pytest_modules.yml

* Rename main software directory to modules

* Remove deprecated modules

* Rename tests software to modules

* Replace paths for tests in pytest_modules.yml

* Replace software with modules in Github Actions

* Replace software with modules in main.nf tests

* Rename software to modules in test.yml
2021-07-07 10:10:18 +01:00

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YAML

name: genmap_mappability
description: create mappability file for a genome
keywords:
- mappability
tools:
- genmap:
description: Ultra-fast computation of genome mappability.
homepage: https://github.com/cpockrandt/genmap
documentation: https://github.com/cpockrandt/genmap
tool_dev_url: https://github.com/cpockrandt/genmap
doi: "10.1093/bioinformatics/btaa222"
licence: ['BSD']
input:
- fasta:
type: file
description: fasta file
pattern: "*.{fasta,fa}"
- index:
type: file
description: index file
output:
- version:
type: file
description: File containing software version
pattern: "*.{version.txt}"
- wig:
type: file
description: genmap wig mappability file
pattern: "*.wig"
- bedgraph:
type: file
description: genmap bedgraph mappability file
pattern: "*.bedgraph"
- txt:
type: file
description: genmap text mappability file
pattern: "*.txt"
authors:
- "@jianhong"