nf-core_modules/tests/modules/entrezdirect/xtract/test.yml
James A. Fellows Yates 90aef30f43
Set process label to process_single for modules with no task.cpus usage (#2076)
* Set process label to `process_single` for modules with no `task.cpus` usage

* Fix tests of 'borked' modules

* prettier

* More modules are single-threaded and can use process_single

* Adding process_single to hmmer/esl* modules

* Fix failing tests

* Prettier

Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk>
Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>
2022-09-19 11:54:47 +02:00

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YAML

- name: entrezdirect xtract test_entrezdirect_xtract_assembly
command: nextflow run ./tests/modules/entrezdirect/xtract -entry test_entrezdirect_xtract_assembly -c ./tests/config/nextflow.config -c ./tests/modules/entrezdirect/xtract/nextflow.config
tags:
- entrezdirect
- entrezdirect/xtract
files:
- path: output/entrezdirect/test_assembly.txt
md5sum: 17073db7c14890aef30f5e3f2d003d32
- name: entrezdirect xtract test_entrezdirect_xtract_genome
command: nextflow run ./tests/modules/entrezdirect/xtract -entry test_entrezdirect_xtract_genome -c ./tests/config/nextflow.config -c ./tests/modules/entrezdirect/xtract/nextflow.config
tags:
- entrezdirect
- entrezdirect/xtract
files:
- path: output/entrezdirect/test_genome.txt
md5sum: 931279db7c80c5bb9ed523815898a9cd