| .. |
|
bandage/image
|
Address review comments
|
2021-02-04 12:10:54 -06:00 |
|
bcftools
|
Adding arguments to make md5 hashes stable
|
2021-02-23 19:39:24 +01:00 |
|
bedtools
|
Update tests/software/bedtools/maskfasta/main.nf
|
2021-02-09 21:36:38 +00:00 |
|
bismark
|
add bismark/deduplicate + tests
|
2021-02-23 18:02:16 +01:00 |
|
blast
|
Adding blast blastn module
|
2021-02-09 16:58:36 +01:00 |
|
bowtie
|
Update tests/software/bowtie/align/test.yml
|
2021-02-04 10:19:28 +00:00 |
|
bowtie2
|
Update tests/software/bowtie2/build/test.yml
|
2021-02-04 10:07:44 +00:00 |
|
bwa
|
fix: update checksum or filename
|
2021-02-17 01:34:50 +01:00 |
|
bwamem2
|
fix: update checksum or filename
|
2021-02-17 01:34:50 +01:00 |
|
bwameth
|
bwameth/index: update test.yml
|
2021-02-20 12:55:09 +01:00 |
|
cat/fastq
|
Fixing test tags
|
2021-02-12 18:49:57 +01:00 |
|
cutadapt
|
Restructure tests to run individually for each module
|
2021-02-03 16:02:58 +00:00 |
|
dsh
|
Change path to tests
|
2021-02-03 16:44:56 +00:00 |
|
fastp
|
fix: update checksum or filename
|
2021-02-17 01:34:50 +01:00 |
|
fastqc
|
Fix fastqc test
|
2021-02-03 17:03:30 +00:00 |
|
gatk/createsequencedictionary
|
fix: correct md5sum
|
2021-02-16 13:54:54 +01:00 |
|
gatk4
|
added gatk4 revertsam
|
2021-02-22 15:21:39 +01:00 |
|
gffread
|
Restructure tests to run individually for each module
|
2021-02-03 16:02:58 +00:00 |
|
gunzip
|
Fix file output path on test
|
2021-02-09 10:22:50 +01:00 |
|
ivar
|
Update test script
|
2021-02-23 20:43:05 +00:00 |
|
methyldackel
|
add methyldackel/mbias + tests
|
2021-02-17 19:27:57 +01:00 |
|
minimap2/align
|
Remove single_end if/else
|
2021-02-05 11:35:11 -06:00 |
|
mosdepth
|
Adding mosdepth module
|
2021-02-15 14:33:44 +01:00 |
|
multiqc
|
Fix multiqc tests
|
2021-02-03 17:43:14 +00:00 |
|
pangolin
|
fix: update checksum or filename
|
2021-02-17 01:34:50 +01:00 |
|
picard
|
Fix picard mergesamfiles test
|
2021-02-03 17:31:41 +00:00 |
|
preseq/lcextrap
|
Fix preseq tests
|
2021-02-03 17:28:44 +00:00 |
|
qualimap/bamqc
|
add qualimap/bamqc + test
|
2021-02-17 17:34:51 +01:00 |
|
quast
|
Restructure tests to run individually for each module
|
2021-02-03 16:02:58 +00:00 |
|
salmon
|
Fix salmon quant tests
|
2021-02-03 17:36:06 +00:00 |
|
samtools
|
Update tests/software/samtools/faidx/main.nf
|
2021-02-17 17:24:50 +01:00 |
|
seacr/callpeak
|
Change path to tests
|
2021-02-03 16:44:56 +00:00 |
|
seqkit/split2
|
Add all tests back in
|
2021-02-24 09:57:23 +01:00 |
|
seqwish/induce
|
Add module for seqwish/induce
|
2021-02-17 11:19:47 -06:00 |
|
star
|
fix: update checksum or filename
|
2021-02-17 01:34:50 +01:00 |
|
stringtie
|
fix: update checksum or filename
|
2021-02-17 01:34:50 +01:00 |
|
tabix
|
Merge pull request #180 from MaxUlysse/master_tabix_bgzip
|
2021-02-16 23:32:23 +00:00 |
|
tiddit/sv
|
Check only for vcf file to exists (includes cmd)
|
2021-02-26 07:14:29 +01:00 |
|
TOOL/SUBTOOL
|
fix: update checksum or filename
|
2021-02-17 01:34:50 +01:00 |
|
trimgalore
|
Fix trimgalore test
|
2021-02-03 17:02:52 +00:00 |
|
ucsc/bedgraphtobigwig
|
Change path to tests
|
2021-02-03 16:44:56 +00:00 |
|
untar
|
Add untar module
|
2021-02-09 11:50:32 +01:00 |
